Friday, October 12, 2012

Progeria: Possible Treatment



                I pay attention to you guys, you know.  I like to watch how the Top Five posts change over time.  The Central Dogma will probably always be number one since it is so essential to understanding many of the posts on here, but I find it really interesting that Cancerous Mutational Problems is hanging strong in the fourth position!  I’m even more amazed that Progeria is number two.  I wrote that post while very sick so I’m glad to see it’s getting so much love.  In fact, I’m so glad that when I saw a blurb in Nature magazine this week about a new progeria treatment, I immediately pulled up the paper and decided to write a post about it.  Consider this Progeria: Part Two (and you might want to read up on The Central Dogma while we’re at it…)

                .  If you’ve read any of my disease posts (HPV, Sickle Cell Anemia, Influenza), you’ll know that I’m completely fascinated by understanding diseases at the molecular and cellular level.  The patient symptoms are all caused by problems way down at the atomic level.  I think it’s awesome that scientists can identify one protein, one mutation, one mechanism of action that can lead to such larger effects.  In Sickle Cell Anemia, a simple DNA base change from A to T is able to distort the entire structure of hemoglobin, which disrupts the structure of red blood cells causing them to clump and clog blood vessels leading to pain, anemia, and inflammation.  One small DNA base change!  

                Interestingly enough, progeria is very similar in its cause.  

The gene LMNA encodes for the protein lamin A, which is necessary for our cells’ nuclei to maintain structure.  After the protein is translated at the ribosome, lamin A has a molecule attached to it that I’m going to call an F group.  Many proteins gain F groups and they are useful for keeping proteins attached to membranes instead of floating off into the cytoplasm (Figure 4.2).  As with anything in cells, a specialized protein exists to add F groups to proteins; we will call it the FT protein.


 After a time, it becomes necessary for lamin A to remove its F group.  Luckily, the very end of its protein has an area that allows for the F group to be cut off.  

The entire process of creating lamin A is outlined in Figure 77.1.


So what is different about patients with progeria?

The LMNA gene has one DNA base change, which is also called by scientists as a point mutation.  

At the outset, one probably wouldn’t think one DNA base change is a big deal.  However, similar to sickle cell anemia, this switch of a base at this particular point leads to protein that differs in function and localization within the cell.

The LMNA gene is transcribed with the point mutation and the resulting protein translated at the ribosome lacks the end necessary for removing an F group.  A lamin A protein unable to have its F group removed is called progerin.  The FT protein comes along, adds the F group and now progerin is stuck in membranes.  Specifically, progerin builds up at the inner nuclear membrane resulting in distortion of the nucleus (Figure 4.2).  Scientists feel that the progeria symptoms are based, at least in part, on this build up of progerin at the nuclear membrane.

The entire process of making progerin is outlined in Figure 77.2.


So, now what?  I told you that many proteins gain F groups, not merely lamin A/progerin, and one is a particular class of proteins that are highly involved with cancer called Ras proteins.  If Ras proteins can’t gain an F group and therefore embed themselves in the cellular membrane then they are far less able to mediate their cancer-causing problems.  For this reason, researchers developed drugs capable of binding to proteins where an F group would be added and rendering an FT unable to do so.  These drugs are called FTIs.  Unfortunately for a variety of reasons, the FTI lonafarib wasn’t an amazing cancer drug, but scientists wondered if it would be beneficial for progeria.  If the progerin protein can’t gain the F group then it won’t become stuck in membranes, cluster at the nuclear membrane, and cause symptoms in its sufferers (Figure 77.3).



And now we’ve come to the new/re-purposed progeria drug that is being discussed in the news right now: lonafarnib!  I’ll sum up the results briefly for you here, but if you are curious and want to read more, check out my newest post on Dr. Amedeo, Progeria Hope!.  The beginning is a bit science-y, but the last few paragraphs discuss the drug’s ability to improve progeria patients.

Researchers originally showed that cells expressing progerin that were treated with lonafarnib had nuclei that returned to normal shape and function.  Mice expressing progerin also displayed improvements from their progerin-related symptoms.  For this reason, scientists set out to do an initial clinical trial involving 75% of the worldwide progeria population.  After two years, each child showed improvement in at least one of the following groups: increased weight gain, improved cardiovascular stiffness, bone structure, and audiological status.  By far and away the most important gain for those with progeria is the improvement in cardiovascular health, since ultimately this is what causes death for those with progeria.


F group: This is actually called a farnesyl group, but I worried such a chemistry-related word would make people stop reading!  It’s a 15 carbon molecule that is hydrophobic and used by many proteins to anchor themselves to membranes (whose inside are also hydrophobic).

FT protein: This is actually called a farnesyltransferase.

Point mutation: One DNA base change from a healthy person’s gene (also called wild type gene among the scientific community) and a mutated gene.

Progerin: A shortened form of the protein lamin A that cannot have its F group removed.

FTIs: These are actually called farnesyltransferase inhibitors.

REFERENCES

Gordon et al. PNAS (2012) 109(41) pgs. 16666 – 16671 

Alberts et al. “Molecular Biology of the Cell, 4th Edition.”  Garland Science, New York, New York. (2002).


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